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View Structure Prediction Details

Protein: gi|54310623, gi|...
Organism: Photobacterium profundum SS9
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54310623, gi|....

Description E-value Query
Range
Subject
Range
gi|28808075, gi|... - gi|28899823|ref|NP_799428.1| SpoOM-related protein [Vibrio parahaemolyticus RIMD 2210633], gi|288080...
gi|28808075 - gi|28808075|dbj|BAC61312.1| SpoOM-related protein [Vibrio parahaemolyticus RIMD 2210633]
383.0 [0..1] [261..3]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFRKSFAS LGIGAAKVDT VLKHDVLIPG ENLPVVIHVQ GGATEQQIDN INVQLCCRYI  60
   61 DEVPVSRGDS EHRKEKRPQT CVLATWSLPE SFVIGVNEAR EFDVNLELPF NTPVTIGDAK 120
  121 VWLETYLDIP LARDPKDTDT LTVRPEPLMD GVFTALENAG LRILQVECEA ASGFDLPFVQ 180
  181 EFEFVPVSGP YHGLWRELEV VAYRDSDGLQ LWFELDRRLK GISGMLSGFL GRGELKRHCH 240
  241 ISAQCTPTEA GQQVLDYLDQ TT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.94
Match: 2fauA
Description: No description for 2fauA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle