| Protein: | gi|54310362, gi|... |
| Organism: | Photobacterium profundum SS9 |
| Length: | 208 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54310362, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
272.0 | [0..9] | [208..1] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MKPVIIKPLK KSKGFTLIEG IIAIVIMGIA MVTLTSFLFP QIEQSATPHY QARASALANA 60
61 FMTEILARKF DHNSDDNGER FRCDDNVHPD LTLIPPPAPT PPACTVTLGP DSENRTQL
|
| Detection Method: |  |
| Confidence: | 2.67 |
| Match: | 1oqwA |
| Description: | Pilin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [119-208] |
1 11 21 31 41 51
| | | | | |
1 NDVDDYIGCW VGENRSCTDE RGKITDIVGI EVNDQYKNFV VSVDVFYDAN HDNQADDASV 60
61 KANRRHKRIN LTVDAGRYGT YQFSAYRSNY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.803 | N/A | N/A | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.583 | N/A | N/A | d.58.12 | eEF-1beta-like |
| View | Download | 0.556 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.544 | N/A | N/A | d.17.2 | Copper amine oxidase, domains 1 and 2 |
| View | Download | 0.505 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
