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View Structure Prediction Details

Protein: gi|46914782, gi|...
Organism: Photobacterium profundum SS9
Length: 165 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914782, gi|....

Description E-value Query
Range
Subject
Range
gi|26249786, gi|... - gi|26249786|ref|NP_755826.1| hypothetical protein c3960 [Escherichia coli CFT073], gi|26110214|gb|AA...
gi|110807066, gi... - gi|110807066|ref|YP_690586.1| hypothetical protein SFV_3230 [Shigella flexneri 5 str. 8401], gi|1106...
gi|24053674, gi|... - ref|NP_708999.1| hypothetical protein SF3240 [Shigella flexneri 2a str. 301], gb|AAN44706.1| orf, c...
gi|91212625, gi|... - gi|91212625|ref|YP_542611.1| hypothetical protein UTI89_C3636 [Escherichia coli UTI89], gi|91074199|...
173.0 [0..1] [165..15]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLYKISTLL FLCLSTPSWA LSNDTEQPIY IDSDNQELDI QKNIVTFTGN VILRQGSIDI  60
   61 RADKVVITRP NGQDGQETID AYGKPATFHQ IMDDGKPIDG ASLKMRYETA IDFLKMTDEA 120
  121 ILIQEGSEIQ GNVITYKIDE QRLVAESGKT KRVTTILQPK NLNKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 56.508638
Match: PF03968.5
Description: No description for PF03968.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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