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View Structure Prediction Details

Protein: YACG_PHOPR
Organism: Photobacterium profundum SS9
Length: 76 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YACG_PHOPR.

Description E-value Query
Range
Subject
Range
gi|90326962, gi|... - gi|90411984|ref|ZP_01219991.1| zinc-binding protein [Photobacterium profundum 3TCK], gi|90326962|gb|...
112.0 [0..7] [76..2]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLPVSQSN TPTTPIIVKC PTCKKEVEWG EQSPYRPFCT KRCQLIDLGE WAEEEKSIPG  60
   61 APDLSDSDGW SDDMGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 1lv3A
Description: Hypothetical zinc finger protein YacG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.684232803797358 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle