YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|54310267, gi|...
Organism: Photobacterium profundum SS9
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54310267, gi|....

Description E-value Query
Range
Subject
Range
gi|90412014, gi|... - gi|90412014|ref|ZP_01220021.1| putative carbonic anhydrase [Photobacterium profundum 3TCK], gi|90326...
286.0 [0..1] [218..1]

Back

Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADIKQLFAN NLSWSKSIKE ETPEFFSHLA ESQQPQYLWI GCSDSRVPAE RLTGLDSGEL  60
   61 FVHRNVANQV IHTDLNCLSV IQYAVDVLKV KHIIVCGHYG CGGVTAAIEN PPLGLINNWL 120
  121 LHIRDLYLKH RSELGTLPRE DWDNKLCEIN VASQVYNLGN STVMQQAWER GQQVKIHGWI 180
  181 YGMNNGVLRD LGVTATSRES LEIAYQAAMS AILPPKEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.39794
Match: 2a8cA
Description: No description for 2a8cA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle