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View Structure Prediction Details

Protein: gi|46914431, gi|...
Organism: Photobacterium profundum SS9
Length: 126 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914431, gi|....

Description E-value Query
Range
Subject
Range
gi|27359848, gi|... - gi|27363732|ref|NP_759260.1| hypothetical protein VV1_0251 [Vibrio vulnificus CMCP6], gi|27359848|gb...
gi|37197859, gi|... - gi|37679117|ref|NP_933726.1| hypothetical protein VV0933 [Vibrio vulnificus YJ016], gi|37197859|dbj|...
132.0 [0..1] [124..1]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYESVKHLHF VAIALSVSLF IVRYCLMMAN SPLLGKKFLK ITPHAVDTVL LLTGVGLIFI  60
   61 TGFMPFTAGG GWLTEKITCV FAYIALGVFT LHVGKNKVFK TFAFFGALGW IVLAAKLAVM 120
  121 KTPLLG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.207608
Match: PF04247.3
Description: No description for PF04247.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle