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View Structure Prediction Details

Protein: gi|54309726, gi|...
Organism: Photobacterium profundum SS9
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54309726, gi|....

Description E-value Query
Range
Subject
Range
gi|37679371, gi|... - gi|37679371|ref|NP_933980.1| SoxR-reducing system protein RsxE [Vibrio vulnificus YJ016], gi|3719811...
286.0 [0..1] [232..5]

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Predicted Domain #1
Region A:
Residues: [1-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNKELMKN GMWVNNPAIV QLLGLCPLLA VSSTVTNALG LGLATTAVLV GSNLIVSLVR  60
   61 QWIPSEVRIP VFVMIIAALV TCVQLLMNAY TYGLYQSLGI FIPLIVTNCI IIGRAEAFAS 120
  121 KNDPIPATLD GLWMGLGMTA ALVVLGAMRE ILGNGTLFDG ADRLLGDWAL SLRIEVFNFD 180
  181 SSFLLAMLPP GAFLGVGFMI ALKNVIDKKR EEKKALTADK KPEIERVRIT SAD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 102.958607
Match: PF02508.5
Description: No description for PF02508.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle