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View Structure Prediction Details

Protein: gi|54309036, gi|...
Organism: Photobacterium profundum SS9
Length: 255 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54309036, gi|....

Description E-value Query
Range
Subject
Range
gi|90415141, gi|... - gi|90415141|ref|ZP_01223093.1| Hypothetical bax protein [Photobacterium profundum 3TCK], gi|90323729...
222.0 [0..1] [255..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKNKVVIAA LMSALMVGCG DTPNSDESVN VASLSKPNFS AMTDVNEKKT AFFAYLMPSV  60
   61 EQENKRVTKE RDFLLRIKAE LDAGKSPDSE EIDHARRLSK MY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVSFTGDGVT DTWLSHMLLR VDVLPKELVL SQAANESAWG TSRFATEGNN YFGQWCYRKG  60
   61 CGLVPLARNE GSTHEVAVFE SAYRSVNAYF MNVNRNSAYA ELRELRAAQR RAGKPIEGTK 120
  121 LAEGLIRYSE RGNAYVTEIQ AMIKHNNKYW SQG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 1gbsA
Description: CRYSTAL STRUCTURE OF BLACK SWAN GOOSE-TYPE LYSOZYME AT 1.8 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.699834934173354 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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