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View Structure Prediction Details

Protein: gi|54308623, gi|...
Organism: Photobacterium profundum SS9
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54308623, gi|....

Description E-value Query
Range
Subject
Range
gi|90327377, gi|... - gi|90411815|ref|ZP_01219824.1| putative nicotinamide mononucleotide transporter [Photobacterium prof...
250.0 [0..1] [248..1]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDILAWFDIN NTLVNIPIGG GYAMSWIEAV GTVFGLLCIW YASQEKTINY VFGLINVSLF  60
   61 AIIFFQIQLY GILMLQLFFF CANIYGWYAW TRPSSEDGDM LEVRWLNKQK MAFTAAVSVA 120
  121 AIAIMTVFID PIFFALANIS VDVLNTFGAD LARPELSPDA FPFWDSVMTV LSIVAQILMT 180
  181 RKYVENWMLW VVINMISVCI YAAQGVYALS IEYAILLFIA ANGSRQWMKT AKQNQQSKQH 240
  241 DQAAEVKA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 60.327902
Match: PF04973.3
Description: No description for PF04973.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle