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View Structure Prediction Details

Protein: gi|54308266, gi|...
Organism: Photobacterium profundum SS9
Length: 184 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54308266, gi|....

Description E-value Query
Range
Subject
Range
gi|90327510, gi|... - gi|90411620|ref|ZP_01219630.1| hypothetical starvation-inducible outer membrane lipoprotein [Photoba...
277.0 [0..1] [184..1]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRKLFLGLF IFFVVGCASI PDSLKTQTET PITDFATIVD DPASVQHKEV RLGGIIASIT  60
   61 NEKHRTRIEM ASLPLTSDGR PKLDEKPQGR FVAYVDGLLE PLEYTQGRLL TVVGTLDGNE 120
  121 KGKVGEFEYT FPVVTVSGSQ IWQIKQEIRI DNFDAYHSCI GTRCSFMNYG FGSTRGEVKQ 180
  181 RVTK

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Detection Method: Pfam
Confidence: 44.036212
Match: PF03843.4
Description: No description for PF03843.4 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle