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View Structure Prediction Details

Protein: gi|54308190, gi|...
Organism: Photobacterium profundum SS9
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54308190, gi|....

Description E-value Query
Range
Subject
Range
gi|46913351, gi|... - gi|54308921|ref|YP_129941.1| hypothetical protein PBPRA1732 [Photobacterium profundum SS9], gi|46913...
290.0 [0..2] [237..21]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALWVFEQKK RGLTNTQIDK KSQSMKLAAI ASARGNLIHD FKNFYLLAED LQKGGSILGK  60
   61 YEITKNGAKS YITFKGNHKL RSLIKGTRYL SGNAKILALG IGKAGMKASA KTGVLMTVIY 120
  121 SVPFRTLELA LNKNYLITNW IVNISSDVIK AAISAVFGYT IGAISSSGGV ILVPIFAGIA 180
  181 AAFVMGELLT IFEGRYLVKD RIIDSINNFI ETRTREYIDN RQGVNFSRAA IQQLRTSTHG 240
  241 VNF

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle