| Protein: | gi|46912522, gi|... |
| Organism: | Photobacterium profundum SS9 |
| Length: | 238 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912522, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
248.0 | [0..1] | [237..1] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MAGITGAGQS NLSYLDQLKG MQEKKLQDTQ SKVTGQNELK QDDFLSLLTK QLAQQDPFKP 60
61 VGNDQMIAQM ASFATVDGIN QMNEQFGSLN SAMTSSQALQ ASSLVGRDVL IPGATGVKKA 120
121 EGGITGMVKL PQAL
|
| Detection Method: |  |
| Confidence: | 21.79588 |
| Match: | PF03963.5 |
| Description: | No description for PF03963.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.491 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.437 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.429 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.374 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.370 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
|
Region A: Residues: [135-238] |
1 11 21 31 41 51
| | | | | |
1 DNMMVRIENE QGQLIKTFDL GAKPPGEHRL EWDGTDEDGK PLPEGRYQVK ASGMVGGENR 60
61 EFEVSTYANV NSVLLGNGDG NVMLNLAGHN SPFKLAEVLE VGKA
|
| Detection Method: | |
| Confidence: | 9.045757 |
| Match: | 1xf1A |
| Description: | Structure of C5a peptidase- a key virulence factor from Streptococcus |
Matching Structure (courtesy of the PDB): |
|
