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View Structure Prediction Details

Protein: gi|54307998, gi|...
Organism: Photobacterium profundum SS9
Length: 161 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54307998, gi|....

Description E-value Query
Range
Subject
Range
gi|229681230, gi... - gi|229901301|ref|ZP_04516423.1| Phosphatidylglycerophosphatase A [Yersinia pestis Nepal516], gi|2296...
gi|22124911, gi|... - gi|22124911|ref|NP_668334.1| phosphatidylglycerophosphatase [Yersinia pestis KIM], gi|21957748|gb|AA...
203.0 [0..1] [159..10]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPKDRINL KNPWHFLATG FGSGLSPIIP GTMGTVASIP LYLLIVQLPF AAYILITIVA  60
   61 AMIGITICQK TSDDMGVHDH GSIVWDEFVG FWITMAIAPV VNWQWILAGF VLFRFFDMIK 120
  121 PWPISWLDKH VHGGFGIMVD DILAGFMAMI CLWGVGHWFG W

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.57
Match: 1rfzA
Description: Structure of hypothetical protein APC35681 from Bacillus stearothermophilus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle