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View Structure Prediction Details

Protein: gi|54307981, gi|...
Organism: Photobacterium profundum SS9
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54307981, gi|....

Description E-value Query
Range
Subject
Range
gi|90328101, gi|... - gi|90410888|ref|ZP_01218902.1| Putative cytosine/adenosine deaminase [Photobacterium profundum 3TCK]...
200.0 [0..2] [171..6]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDNTDVNHD EQYMRRAIEL ASQAEAEGEV PVGAVVVYNG QVVGEGWNRS IGQHDATAHA  60
   61 EMMALRQAGK VVQNYRLLDA TLYVTLEPCP MCAGAMVHSR IGKVIFGASD LKTGAAGSVM 120
  121 NLLSYDEVNH HVDCQSGVLD EECRAQLQAF FKRRRAEKKA EKKARQAALD N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1z3aA
Description: Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.31157621537132 bayes_pls_golite062009
hydrolase activity 0.0250559965040226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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