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View Structure Prediction Details

Protein: gi|46912215, gi|...
Organism: Photobacterium profundum SS9
Length: 97 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912215, gi|....

Description E-value Query
Range
Subject
Range
gi|68202087, gi|... - gi|68230339|ref|ZP_00569524.1| Ribosomal protein S20p [Frankia sp. EAN1pec], gi|68202087|gb|EAN16274...
106.0 [0..11] [93..90]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPYQDLGVT PLANIKSAKK RAITSEKRRQ HNASRRSMMR TFFKKVIAAI EAGEKENATK  60
   61 AFADMQPVLD RMATKGLIHK NKAARQKARL TAKIKAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.0
Match: 1vs5T
Description: No description for 1vs5T was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.29274818810663 bayes_pls_golite062009
structural molecule activity 8.72221486384695 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle