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View Structure Prediction Details

Protein: gi|54307667, gi|...
Organism: Photobacterium profundum SS9
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54307667, gi|....

Description E-value Query
Range
Subject
Range
gi|28805412 - gi|28805412|dbj|BAC58692.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746312, gi... - gi|153840092|ref|ZP_01992759.1| esterase YqiA [Vibrio parahaemolyticus AQ3810], gi|149746312|gb|EDM5...
gi|28897203, gi|... - gi|28897203|ref|NP_796808.1| esterase YqiA [Vibrio parahaemolyticus RIMD 2210633], gi|28805412|dbj|B...
155.0 [0..1] [188..7]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYIHGFNSS PLSLKAQVMA EYCKQHRPDI RVEIPQMPCY PAQAATFIDD LVSNFKQDYT  60
   61 IGLVGSSLGG YISTWLNSRH QLPAVLVNPA VKPYELLQDY LGEQVNPYTN EKYWLEPQHI 120
  121 NELRVMDVEQ LVDPKQFWLL QQMGDEVLDY RQAVAKYAAS KQTVEPNGDH SFVDFERFPA 180
  181 DVIQFLNL

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Detection Method: PSI-BLAST
Confidence: 21.221849
Match: 1va4A
Description: Pseudomonas fluorescens aryl esterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity 0.63165630246021 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0166640502592221 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle