YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|46912068, gi|...
Organism: Photobacterium profundum SS9
Length: 147 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912068, gi|....

Description E-value Query
Range
Subject
Range
gi|69245352, gi|... - gi|69245352|ref|ZP_00603396.1| GatB/Yqey [Enterococcus faecium DO], gi|68195882|gb|EAN10317.1| GatB/...
151.0 [0..1] [146..1]

Back

Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLTERLKDE QIAAMKARNK PRLGAIRLVL AAIKQREVDE RITLSDEDVL AVLVKMVKQR  60
   61 RDSVAQYEAA NRQDLADVEL AEIAVLDEFM PQPLSDDEVI ALLDEAVAST GAVSMQDMGK 120
  121 LMGVLKPLIQ GRADMGKVSQ LVKAKLG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.0
Match: 1ng6A
Description: Hypothetical protein YqeY
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle