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View Structure Prediction Details

Protein: gi|46916867, gi|...
Organism: Photobacterium profundum SS9
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46916867, gi|....

Description E-value Query
Range
Subject
Range
gi|90410072, gi|... - gi|90410072|ref|ZP_01218089.1| putative thioredoxin 2 [Photobacterium profundum 3TCK], gi|90329425|g...
160.0 [0..1] [146..1]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTMTTRCPH CKAMNRIPTE RIEDTATCGS CKEKLLDGKP IEGTTSNFLS LIQSDTPVVV  60
   61 DFWAPWCNPC VGFAPIFEDV AAERSGDARF VKIDTEAQQE LAAQYRIRSI PTIMVFKNGQ 120
  121 LLNNLNGALP KSQFNQWLNE TLEQAK

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Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1v98A
Description: Crystal Structure Analysis of Thioredoxin from Thermus thermophilus
Matching Structure (courtesy of the PDB):

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