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View Structure Prediction Details

Protein: gi|52218296, gi|...
Organism: Bacteroides fragilis YCH46
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52218296, gi|....

Description E-value Query
Range
Subject
Range
gi|60494838, gi|... - gi|60683404|ref|YP_213548.1| putative formimidoyltransferase-cyclodeaminase [Bacteroides fragilis NC...
510.0 [0..1] [300..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWNKIVECV PNFSEGRDLE KIDRIVAPFR ARSGVKLLDY SNDEDHNRLV VTLIGEPEAL  60
   61 RDAVIEAIGV AVELIDLNHH RGQHPRMGAV DVVPFIPIKN VTMDEAVSLS REIGEKVAGL 120
  121 YHLPVFLYEK SATAPHRENL AAVRKGEFEG MAEKMKLPEW HPDYGPAGCH PTAGVVAIGA 180
  181 RMPLVAYNIN LSTDNLEIAT KIAKNIRHIN GGLRYVKAMG VELKERNITQ VSINMTDYTR 240
  241 TALYRAFELV RIEARRYGVT ILGSEIVGLV PMEALIDTAS YYLGLENFSM RQVLESRIME 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1tt9A
Description: Structure of the bifunctional and Golgi associated formiminotransferase cyclodeaminase octamer
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle