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View Structure Prediction Details

Protein: gi|53714676, gi|...
Organism: Bacteroides fragilis YCH46
Length: 191 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53714676, gi|....

Description E-value Query
Range
Subject
Range
YA83_METJA, Y108... - (Q58483) Hypothetical protein MJ1083, Uncharacterized protein MJ1083 - Methanococcus jannaschii, Iro...
ISF2_METJA - Iron-sulfur flavoprotein MJ1083 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL...
169.0 [0..1] [190..1]

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Predicted Domain #1
Region A:
Residues: [1-191]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIVAFNGSP RKGGNTELLI KEVFKPIQEA GIETELVQLG GKLLRGCASC YTCFKTKDGK  60
   61 CAIKTDPMNE FIQKAQEADG IILASPTYYG SVSAEMKAFM DRLGLTTIGQ GRTLTRKVGA 120
  121 AVISVRRGGA VTVYDELNRF MLGSGMIVPG STYWNFGIGE MPGEVFDDAE GLRNMKDLGV 180
  181 QLAWLLKAIH N

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Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 2a5lA
Description: The crystal structure of the Trp repressor binding protein WrbA from Pseudomonas aeruginosa
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.275631658558537 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle