YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|53720749, gi\|...
Organism:	Burkholderia pseudomallei K96243
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53720749, gi|....

Description	E-value	Query Range	Subject Range
gi\|254253454, gi... - gi\|84360612\|ref\|ZP_00985310.1\| COG5007: Predicted transcriptional regulator, BolA superfamily [Burkh... gi\|189351722, gi... - gi\|189351722\|ref\|YP_001947350.1\| BolA superfamily transcriptional regulator [Burkholderia multivoran... gi\|167587700 - gi\|167587700\|ref\|ZP_02380088.1\| BolA family protein [Burkholderia ubonensis Bu] gi\|221172870, gi... - gi\|221207282\|ref\|ZP_03580292.1\| BolA/YrbA family protein [Burkholderia multivorans CGD2], gi\|2211728... gi\|221201643, gi... - gi\|221201643\|ref\|ZP_03574681.1\| BolA/YrbA family protein [Burkholderia multivorans CGD2M], gi\|221178...	118.0	[0..1]	[79..1]

Back

Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTPELVKQ YIEAGLACTH LEVEGDGQHF FATIVSSAFE GKRPIQRHQL VYAALGDRMK  60
   61 QEIHALSMKT LTPAEWQNA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	21.69897
Match:	1xs3A
Description:	Solution Structure Analysis of the XC975 protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits