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View Structure Prediction Details

Protein: gi|52308304, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 144 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52308304, gi|....

Description E-value Query
Range
Subject
Range
gi|170718517, gi... - gi|32028645|ref|ZP_00131801.1| COG3076: Uncharacterized protein conserved in bacteria [Haemophilus s...
gi|23468052, gi|... - gi|23468052|ref|ZP_00123623.1| COG3076: Uncharacterized protein conserved in bacteria [Haemophilus s...
195.0 [0..1] [137..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLQELRAE TREIITDLLN DGSDPDALYI IEHHIAHYDF DKLEKIAVDA FKAGYEVSEA  60
   61 EEFEDENGKV IYCFDIISEV ELKPEIIDLQ QKEILPILQK HNGIYDGWGT YFEDPNASDD 120
  121 EYGDDGEFFD DEDDFDDENE RPVH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.09691
Match: 1nxiA
Description: Hypothetical protein VC0424
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle