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View Structure Prediction Details

Protein: gi|52426111, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52426111, gi|....

Description E-value Query
Range
Subject
Range
gi|163669631, gi... - gi|76259401|ref|ZP_00767050.1| Cobalamin synthesis protein/P47K:Cobalamin synthesis CobW, C-terminal...
gi|53796751 - ref|ZP_00357676.1| COG0523: Putative GTPases (G3E family) [Chloroflexus aurantiacus]
165.0 [0..6] [177..2]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFDEMNKMT TQNSLPMLGI TGYSGSGKTT LLEKLVPQLT GLGIRVAVIK HTHHDVNIDK  60
   61 PGKDSWRMKE AGASQVIMTC DRRWAIMTET RQPVSLSYLA GQFDSALTDL VLVEGFKQEP 120
  121 IAKILLHRKG MEKTLPELDE YVIATATDYP LVQNLPDLNI NDVPAVARFI QRWYEEKCGQ 180
  181 KNENFAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1np6A
Description: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.37148167194523 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle