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View Structure Prediction Details

Protein: RS13_MANSM
Organism: Mannheimia succiniciproducens MBEL55E
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS13_MANSM.

Description E-value Query
Range
Subject
Range
RS13_MARHV - 30S ribosomal protein S13 OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT...
173.0 [0..1] [118..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIAGINIP DHKHTVIALT AIYGIGKTRS QAICAAAGIA ENVKISELSE EQIDKLRDEV  60
   61 GKFTVEGDLR REVTLNIKRL LDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.0
Match: 1vs5M
Description: No description for 1vs5M was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.75987008608357 bayes_pls_golite062009
structural molecule activity 9.18430883932738 bayes_pls_golite062009
catalytic activity 0.161830442565647 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle