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View Structure Prediction Details

Protein: gi|52307822, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 171 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52307822, gi|....

Description E-value Query
Range
Subject
Range
gi|62181826, gi|... - gi|62181826|ref|YP_218243.1| hypothetical protein SC3256 [Salmonella enterica subsp. enterica serova...
180.0 [0..1] [171..8]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLAINKILL TSALVMTSLS AFALKDDTNQ PINIVSDNQS LDMEKSIVTF TDNVVITQGS  60
   61 ILIKANKVII TRPPEGSKQK ETVEAFGNPV TFHQMLDDGK PADGKANRVH YDLGKEFLTL 120
  121 TGNAQLKQLD STIDGDVITY DVNKQQLKAS STAKSRVKTV LIPSQLNEKK K

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 56.259637
Match: PF03968.5
Description: No description for PF03968.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.334 N/A N/A b.76.2 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
View Download 0.246 N/A N/A b.60.1 Lipocalins
View Download 0.232 N/A N/A b.76.2 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle