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View Structure Prediction Details

Protein: gi|52307109, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52307109, gi|....

Description E-value Query
Range
Subject
Range
gi|37527054, gi|... - gi|37527054|ref|NP_930398.1| colicin V production protein [Photorhabdus luminescens subsp. laumondii...
148.0 [0..2] [158..4]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDYIIIGII VFSIVVSLLR GFVREVMSLA SWVVAFVIAS QFYPYLANFL TQIESEYLRN  60
   61 GTAIGILFIL TLIVGAIVNY VIGQLVDKTG LSGTDRVLGA CFGFLRGVLI VSALLFFVDT 120
  121 FTNFDQNDMW KESKLIPHFG FVVEWFFEQL QANSSFLNST LNK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.065502
Match: PF02674.7
Description: No description for PF02674.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle