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View Structure Prediction Details

Protein: gi|52425017, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52425017, gi|....

Description E-value Query
Range
Subject
Range
gi|75430394, gi|... - gi|75430394|ref|ZP_00732755.1| conserved hypothetical protein HI1333 [Actinobacillus succinogenes 13...
140.0 [0..37] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFPEYKVRI PQFKCFNQKI QFFDRTFFII LGLTMSITLS TKQKQFLKGL AHHLNPVVML  60
   61 GNNGLTEGVL AEIDNALNHH ELIKVKIAGS DRETKQLIID AIIRETGSGA VQTIGHILVL 120
  121 YRPSEDIKIQ LPKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1jo0A
Description: YhbY homologue HI1333
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle