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View Structure Prediction Details

Protein: PRMA_MANSM
Organism: Mannheimia succiniciproducens MBEL55E
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRMA_MANSM.

Description E-value Query
Range		 Subject
Range
PRMA_HAEI8 - Ribosomal protein L11 methyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=prmA PE=3 SV=...
 244.0 [0..1] [290..1]

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Predicted Domain #1
Region A:
Residues: [1-293] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWVQIRLNS TNEKAETISD YLEEIGSVSV TFMDSQDTPI FEPLPGETRL WGNTDVIALF  60
   61 DAETDMQQIV RLLRQEGHLD ENTAYKIEQI EDKDWEREWM DNFHPMQFGK RLWICPSWRE 120
  121 VPDPNAVNVM LDPGLAFGTG THPTTALCLE WLDGLDLAGK TVIDFGCGSG ILAIAALKLG 180
  181 AKEAIGIDID PQAILASRNN AEQNGVADRL KLYLSEDKPA NMKAEVVVAN ILAGPLKELY 240
  241 PVISELVKEK GNLGLSGILA TQAESVCEAY QAKFDLDAVV EREEWCRITG KLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.522879
Match: 1ufkA
Description: Crystal structure of TT0836
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
S-adenosylmethionine-dependent methyltransferase activity 4.81722723955895 bayes_pls_golite062009
methyltransferase activity 4.64500705012502 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 4.57389022626587 bayes_pls_golite062009
protein methyltransferase activity 3.85056781737182 bayes_pls_golite062009
N-methyltransferase activity 3.00112136063228 bayes_pls_golite062009
rRNA methyltransferase activity 2.44443043670156 bayes_pls_golite062009
transferase activity 2.42370637689376 bayes_pls_golite062009
histone methyltransferase activity 2.40337598041915 bayes_pls_golite062009
arginine N-methyltransferase activity 2.25021293330454 bayes_pls_golite062009
protein-arginine N-methyltransferase activity 2.25021293330454 bayes_pls_golite062009
DNA-methyltransferase activity 1.8182614465692 bayes_pls_golite062009
catalytic activity 1.62377578202456 bayes_pls_golite062009
histone-arginine N-methyltransferase activity 1.49701653866454 bayes_pls_golite062009
RNA methyltransferase activity 1.36067005317038 bayes_pls_golite062009
protein-arginine omega-N monomethyltransferase activity 1.16693241506234 bayes_pls_golite062009
site-specific DNA-methyltransferase (adenine-specific) activity 0.88654745691593 bayes_pls_golite062009
protein-arginine omega-N asymmetric methyltransferase activity 0.70686255278148 bayes_pls_golite062009
histone methyltransferase activity (H4-R3 specific) 0.64299622477655 bayes_pls_golite062009
rRNA (adenine) methyltransferase activity 0.42556595268413 bayes_pls_golite062009
O-methyltransferase activity 0.32686871890222 bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity 0.32546946538886 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle