| Protein: | gi|57900655, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 447 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57900655, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..1] | [436..1] |
|
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393.0 | [0..1] | [445..1] |
|
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359.0 | [0..85] | [447..1] |
|
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359.0 | [0..86] | [446..1] |
|
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358.0 | [0..86] | [445..10] |
|
|
358.0 | [0..86] | [447..1] |
|
|
357.0 | [0..86] | [447..1] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MALLQFGGTL APKLGEKPQL LPRSPALTRV IYADPRFLVS KSGSGGRLKH LVSPTASLQS 60
61 RTSSRLFNHA PSPRFRHRRS SR
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.677 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.490 | N/A | N/A | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.489 | N/A | N/A | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.488 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.488 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.414 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.395 | N/A | N/A | a.24.20 | Description not found. |
| View | Download | 0.371 | N/A | N/A | d.129.2 | Phosphoglucomutase, C-terminal domain |
|
Region A: Residues: [83-199] |
1 11 21 31 41 51
| | | | | |
1 FIVRADADFY STLGVSRNAS KSEIKSAYRK LARSYHPDVN KDPGAEQKFK DISNAYEVLS 60
61 DDEKRSIYDK YGEAGLKGAG MGTGDYSNPF DLFESLFEGF GGMGGMGGRA ARNRPMQ
|
| Detection Method: | |
| Confidence: | 22.30103 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-447] |
1 11 21 31 41 51
| | | | | |
1 GDDEAYNLVL NFKEAVFGVE KEIEITRLEG CNTCDGTGAK PGTKPTTCKT CGGQGQVVSS 60
61 TRTPLGIFQQ VSTCNTCGGT GEFSTPCNTC GGDGRVRKTK RISLKVPAGV DSGSRLRVRS 120
121 EGNAGRRGGP PGDLYVFIDV LSDPVLKRDG TNILYTCKVS YIDAILGTTV KVPTVDGMVD 180
181 LKIPSGTQPG TTLVMSKKGV PLLGKSNARG DQLVRVQVEI PKRLSSDERK LIEELANLNK 240
241 AQTANSRR
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| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
