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View Structure Prediction Details

Protein: gi|52627093, gi|...
Organism: Arabidopsis thaliana
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52627093, gi|....

Description E-value Query
Range
Subject
Range
gi|30681260, gi|... - gi|30681260|ref|NP_187646.2| anion-transporting ATPase family protein [Arabidopsis thaliana], gi|119...
216.0 [0..22] [391..40]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALLLLNRV SRSTSSISLH RVAGTLGFNS FNAQIHGDRI SGTLFRVRSL ATLAEGASHF  60
   61 NEMVSVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.30103
Match: 1eg7A
Description: Formyltetrahydrofolate synthetase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [68-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRKYYLLGGK GGVGKTSCAA SLAVKFASHG HPTIVVSTDP AHSLSDSFSQ DLSGGVLKPV  60
   61 QGVDSPLLAL EITPEIMKDE IKRQTGDKSV KNMMDSMGLG MFAGELGDLN LEDMLNAASP 120
  121 GIDEIAAISK VLQFMEAPEY SRFTRIVFDT APTGHTLRLL SLPDFYDSSI SKITKLKKKI 180
  181 TAAASAFKLV FGKKEIQQKE LPNELDQLKE RMEKVRNVFR DVDTTEFVIV TIPTVMAINE 240
  241 SSRLHASLRK ENVPVHRLIV NQLLPQSESD CKFCSIRRKE QTRVLGLIQN DTELSGLKLI 300
  301 QSPLLDAEIR GVPALKFMGD LIWK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1f48A
Description: Arsenite-translocating ATPase ArsA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle