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View Structure Prediction Details

Protein: gi|30693914, gi|...
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30693914, gi|....

Description E-value Query
Range
Subject
Range
gi|7767663 - gi|7767663|gb|AAF69160.1|AC007915_12 F27F5.18 [Arabidopsis thaliana]
274.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVCLPCSF LRTSTLSILF RSPILSTTAA ISFCSSSEFA DSVAKDDSKR GPLKPGLYLV  60
   61 GTPIGNLEDI TLRAIRVLRS ADVILSEDTR HSGKLLQYYN IKAQLLSYHK FNEAQREQAV 120
  121 LTRLKQGEIV ALISDAGTPG ISDPGTQLAK MCAKENIDVI PIPGACAVVA ALSASGLETD 180
  181 EFTFVGFLPK HSGTRKERLI VSSNETRTQI FYVPPHKLSQ FLEETTPYFG ESRQCVIARE 240
  241 ITKLHEEFWR GSIAEAKQEF LIRQPKGEIT LLIEGKEETK AENPTESQLE EELRGLISDG 300
  301 HSLSTAVKTV AERTSMRKKE VYSLALKKFG KQIRVEEEDE ADE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.39794
Match: 1pjqA
Description: Structure and function of CysG, the multifunctional methyltransferase/dehydrogenase/ferrochelatase for siroheme synthesis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.48349578618275 bayes_pls_golite062009
transferase activity 0.839278662168993 bayes_pls_golite062009
methyltransferase activity 0.377572111527375 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.377243985866924 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.202599723107798 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle