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View Structure Prediction Details

Protein: BRCA1_ARATH
Organism: Arabidopsis thaliana
Length: 941 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for BRCA1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTSHLERM GRELKCPICL SLYNSAVSLS CNHVFCNACI VKSMKMDATC PVCKIPYHRR  60
   61 EIRGAPHMDS LVSIYKNMED A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.154902
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #2
Region A:
Residues: [82-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGIKLFVSQN NPSPSDKEKQ VRDASVEKAS DKNRQGSRKG RASKRNEYGK TKEIDVDAPG  60
   61 PIVMKPSSQT KKRVQLLQNL SAESLTKPTE SVETAEKPKD YTENTVIRLD EHPSLNKEGN 120
  121 LSPFFWLRDE DDGENSSQRT ESDQLLGTTP VNVPSFSDLM DSDHESPSKE DEQQKPNPGD 180
  181 MFDSEMFEWT QRPCSPEILP SPVKAKVLGR DEIDLTQKKL PKVKVA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [308-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSKCKNRKAG SARNTVARRS IGVSQEDNME SSAAATISEQ QDSRGTSGTI IRNDVNTDEN  60
   61 VKAKRATRSK AQSTRVQSDL NVSNEADGKQ GTKRKRSSIK SS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [410-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAHPIAGPNE LSLGTEIVGK GDQDQAHGPS DTHPEKRSPT EKPSLKKRGR KSNASSSLKD  60
   61 LSGKTQKKTS EKKLKLDSHM ISSKATQPHG NGILTAGLNQ GGDKQD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [516-714]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRNNRKSTVG KDDHTMQVIE KCSTINKSSS GGSAHLRRCN GSLTKKFTCA FCQCSEDTEA  60
   61 SGEMTHYYRG EPVSADFNGG SKVIHVHKNC AEWAPNVYFN DLTIVNLDVE LTRSRRISCS 120
  121 CCGLKGAALG CYNKSCKNSF HVTCAKLIPE CRWDNVKFVM LCPLDASIKL PCEEANSKDR 180
  181 KCKRTPKEPL HSQPKQVSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [715-941]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KANIRELHIK QFHGFSKKLV LSCSGLTVEE KTVIAEFAEL SGVTISKNWD STVTHVIASI  60
   61 NENGACKRTL KFMMAILEGK WILTIDWIKA CMKNTKYVSE EPYEITMDVH GIREGPYLGR 120
  121 QRALKKKPKL FTGLKFYIMG DFELAYKGYL QDLIVAAGGT ILRRRPVSSD DNEASTIVVF 180
  181 SVEPSKKKTL TQRRSDAEAL AKSARARAAS SSWVLDSIAG CQILVLI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.39794
Match: 3cojX
Description: No description for 3cojX was found.

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