| Protein: | gi|34222074, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 446 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34222074, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..2] | [432..10] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MANDAAACAE RATNDMLIGP DWAINIELCD LINMDPSQAK EAVKVLKKRL GSKNSKVQIL 60
61 ALYALETLSK NCGENVYQLI IDRGLLNDMV KIVKKKPELN VREKILTLLD TWQEAFGGRG 120
121 GRYPQYYNAY NDLRSAGIEF PPR
|
| Detection Method: |  |
| Confidence: | 52.39794 |
| Match: | 1x5bA |
| Description: | The solution structure of the VHS domain of human Signal transducing adaptor molecule 2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [144-310] |
1 11 21 31 41 51
| | | | | |
1 TESSLSFFTP PQTQPDEDAA IQASLQGDDA SSLSLEEIQS AEGSVDVLMD MLGAHDPGNP 60
61 ESLKEEVIVD LVEQCRTYQR RVMTLVNTTT DEELLCQGLA LNDNLQHVLQ RHDDIANVGS 120
121 VPSNGRNTRA PPPVQIVDIN HDDEDDESDD EFARLAHRSS TPTRRPV
|
| Detection Method: | |
| Confidence: | 22.045757 |
| Match: | 1nafA |
| Description: | ADP-ribosylation factor binding protein Gga1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.098272402754001 | bayes_pls_golite062009 |
|
Region A: Residues: [311-446] |
1 11 21 31 41 51
| | | | | |
1 HGSDSGMVDI LSGDVYKPQG NSSSQGVKKP PPPPPHTSSS SSSPVFDDAS PQQSKSSEVI 60
61 RNLPPPPSRH NQRQQFFEHH HSSSGSDSSY EGQTRNLSLT SSEPQKEEKP EDLLFKDLVE 120
121 FAKTRSSKAN NNNRSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
