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View Structure Prediction Details

Protein: NAC8_ARATH
Organism: Arabidopsis thaliana
Length: 449 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC8_ARATH.

Description E-value Query
Range
Subject
Range
gi|12320749 - gi|12320749|gb|AAG50527.1|AC084221_9 unknown protein [Arabidopsis thaliana]
417.0 [0..4] [449..10]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRSWLIDS NRIATKIMSA SASSDPRQVV WKSNPSRHCP KCQHVIDNSD VVDDWPGLPR  60
   61 GVKFDPSDPE IIWHLLAKSG LSGLSSHPFI DEFIPTVNQD DGICYTHPKN LPGVKSDGTV 120
  121 SHFFHKAIKA YSTGTRKRRK IHDDDFGDVR WHKTGRTKPV VLDGVQRGCK KIMVLYGGKA 180
  181 VKTNWVMHQY HLGIEEDEKE GDYVVSKIFY QQPQQLVVKR GDKAEQEVSE DIFAAVTPTA 240
  241 DPVTPKLATP EPRNAVRICS DSHIASDYVT PSDYVSAHEV SL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [283-449]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AETSEVMCME DEVQSIQPNH ERPSSGPELE HGLENGAKEM LDDKEEQEKD RDNENQGEED  60
   61 PTWFDSGSQF ILNSQQLVEA LSLCDDLLGS QDREENTNSG SLKDKQPCIA DYAHLGPEDF 120
  121 KRDLEECQKI VLDPSNIELD TPPEFRLSQL EFGSQDSFLA WGTGKTD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle