YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBK11_ARATH, FBK...
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBK11_ARATH, FBK....

Description E-value Query
Range
Subject
Range
gi|19347782 - gi|19347782|gb|AAL86342.1| putative F5A9.18 protein [Arabidopsis thaliana]
295.0 [0..1] [433..1]

Back

Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRRCDLQP KRTRMCDLQP KRTSMCDLPP KLVGEKILTR IPITSLRAVR STCKLWNALT  60
   61 KDRVLGKAAA QFLGFMTMDS KVCSVRFHLR RSKEEEEDTM DLSIKQVDLL NQVEISRVYH 120
  121 CDGLLLCVAK DNSRVVVWNP YLGQTRWIRP RT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESNIGDSYAL GYDINRNHKI LRMVQTRNVS VYRYEIYDLR SNSWRVLEVT PNGEMDPNHP  60
   61 LYGVSVKGNT YFFAHEDSSS GEIDEDGDII DLEDFLLCFD FTTETFGLRL PLPFHSTID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATVTLSCVRD QQLAVLYHNE GLHSDDRFTT VEFWVTTSIE PNSVSWSKFL TVDMRPLALT  60
   61 GVRFDNDMGA TFFIDEDEKV AVVFDLDGYL STESARYHTA FISGKDGFFK PVTLGVAPNV 120
  121 GEPCPRTGHI PTTYRPPLVC SSTYLPSLVQ VNQQRKRKER HV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle