YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|18495737
Organism:	Mus musculus castaneus
Length:	290 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18495737.

Description	E-value	Query Range	Subject Range
gi\|18495739 - gi\|18495739\|emb\|CAC85419.1\| Arylamine N-acetyltransferase 2 [Mus spretus]	451.0	[0..1]	[290..1]
gi\|15278013 - gi\|15278013\|gb\|AAH12972.1\| Nat2 protein [Mus musculus]	451.0	[0..1]	[290..1]
ARY2_MESAU - Arylamine N-acetyltransferase 2 OS=Mesocricetus auratus GN=NAT2 PE=2 SV=1	444.0	[0..1]	[290..1]
gi\|114618996, gi... - gi\|55630290\|ref\|XP_519630.1\| PREDICTED: N-acetyltransferase 1 isoform 9 [Pan troglodytes], gi\|114618...	443.0	[0..1]	[290..1]
gi\|14530723 - gi\|14530723\|emb\|CAC42397.1\| arylamine N-acetyltransferase [Cricetulus griseus]	443.0	[0..1]	[290..1]
gi\|109085739, gi... - gi\|109085739\|ref\|XP_001098534.1\| PREDICTED: N-acetyltransferase 1 isoform 2 [Macaca mulatta], gi\|109...	441.0	[0..1]	[290..1]
gi\|113420302, gi... - gi\|119584191\|gb\|EAW63787.1\| hCG28250 [Homo sapiens], gi\|113420302\|ref\|XP_001127234.1\| PREDICTED: sim...	441.0	[0..1]	[290..1]

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Predicted Domain #1

Region A:
Residues: [1-290]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIEAYFERI GYQSTRSKLD LKTLTEILQH QIRAIPFENL NIHCGESMEL SLEAIFDQIV  60
   61 RKKRGGWCLQ VNHLLYWALT KLGFETTMLG GYVFNTPANK YSSGMIHLLV QVTISGKDYI 120
  121 VDAGFGRSYQ MWEPLELTSG KDQPQVPAIF RLTEENGTWY LDQIRREQYV PNQEFINSDL 180
  181 LEKNKYRKIY SFTLEPRTIE DFESMNTYLQ TSPASVFTSK SFCSLQTPEG VHCLVGSTLT 240
  241 YRRFSYKDNV DLVEFKSLTE EEIEDVLRTI FGVSLERKLV PKHGDRFFTI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	123.0
Match:	2ijaA
Description:	No description for 2ijaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits