| Protein: | psd-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 348 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for psd-1.
| Description | E-value | Query Range |
Subject Range |
|
|
360.0 | [0..3] | [345..28] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MLDIYSGGFL HPDSLMALNP FLIFVAFWSW VKWLSVSTLI IGGASYVGYL FTPDWREIVD 60
61 SKHYYSNWKI RVYLSLPFNT ASRVIGGLAN QEIPVWLREH LLGGFARMYD CRMDDCVDP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [120-348] |
1 11 21 31 41 51
| | | | | |
1 DFKNYPSFAA FFNRKLKEST RPISASPLVS PADGTVLHFG KVEDNKIEYV KGHDYDVDKF 60
61 LGDVDLPQKD ELDLYQVVIY LAPGDYHAFH SPARWVANQC RHVPGLLLSV RPTLLSHVPH 120
121 LFCLNERVVL NGSWRHGFFS MSAVAATNVG DIVVDAEPSL RTNIVRRKTQ KIMNTETEIH 180
181 APYVSGERVG EFRLGSTIVL VFQAPPTIKF AIKAGDPLRY GQSLVADGV
|
| Detection Method: | |
| Confidence: | 1.27 |
| Match: | 2gprA |
| Description: | GLUCOSE PERMEASE IIA FROM MYCOPLASMA CAPRICOLUM |
Matching Structure (courtesy of the PDB): |
|
