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View Structure Prediction Details

Protein: CE37724
Organism: Caenorhabditis elegans
Length: 569 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37724.

Description E-value Query
Range
Subject
Range
gi|114637968, gi... - gi|114637968|ref|XP_001151595.1| PREDICTED: bestrophin isoform 5 [Pan troglodytes], gi|114637966|ref...
593.0 [0..1] [568..1]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSYNSDVS STSLIAFLRL QLRWRGSVWK SVMRELFIFS FCFAIITSIY RTNYFLSDEQ  60
   61 RVFWDNFAAL FDQTLNYIPL TFMLGFFVTI IVGRWNDIFL NIGWVDNTAL LIATYIRGGD 120
  121 EKSRIMRRTA LRYLVLTQVL IFRDISLVVK KRFPTLETVV ASGFMLESER EKYAALSLGK 180
  181 YPKYFLPIQW CFSLLYDARA QGKIGADVML NELIKSVGDF RKGLGQLLNF DWVPIPLVYP 240
  241 QVVFLAVRIY FFLCLIARQS VLIDGEKPKD NSPVYPFVPF LMTSLQFVFY VGWMKVAESL 300
  301 MNPLGEDDDD FECNYLLDRN LAVGLAIVDS SEAA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.951
Match: 2a0lA
Description: Crystal structure of KvAP-33H1 Fv complex
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [335-569]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PHYEKDVFWG LAIADPLYSS DTANIHINPQ IGSAATYETQ ENEIIMRPHV DTNDMEDGGD  60
   61 DVEGCNPRQL SRFVSVVSVN RNCESRTSLS SRRNPTIIER LRSQFGGSKV NRPGKLFGSS 120
  121 QFSINTAMGD NDIGSCASIL GELAEESNKA SQGLLTPEEY AGSPRRNTPI DMLTSVPEED 180
  181 EEAQKTRTSV DLRKWKEMVE NEKKREEAIE EKRRKLSRKE EEREEDDGDD VEKKE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.62
Match: 1jadA
Description: C-terminal domain of PLC-beta
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle