| Protein: | CE37573 |
| Organism: | Caenorhabditis elegans |
| Length: | 520 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37573.
| Description | E-value | Query Range |
Subject Range |
|
|
215.0 | [0..4] | [287..166] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MAFFNLKFIL AFGYCSISFV IYTLLIIMLL KNWKDFKSAF FHIVIADYFF NLLTWLNSMI 60
61 TLRLPNGTCK DCVLSNLFAS LGKDNQYTSS FLFFCYFLHF GNAYFQYFMV TLMAVNRTTS 120
121 IFFYFVNEKI WSILFPLSLG AVILVEVFFT RTILSTKPYF VFNEALDMYS IKSDSDILSA 180
181 YSNVIIFMGF CVICSIVCNF LSIMQLKLMK KNLSTIERNL LFSTLASSVI QCAAAGNTFL 240
241 LQFDRNAIYG QIGQLLLPFF SDFLTISQPY ILILMSSKNL LTWLNSMITL RIPNGTCK
|
| Detection Method: |  |
| Confidence: | 53.221849 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [299-520] |
1 11 21 31 41 51
| | | | | |
1 DCVLSNLFAS LGKDNQYTSS FLFFCYFLHF GNAYFQYFMV TLMSLNRTTS IFFYFVNEKI 60
61 WKFLFPFSIV LIIGITTFCA RTILATSPYY LYNEVLDMYY IKSDSNILPA YYNILYFMAF 120
121 SVASSIFLNV IAVIRLKMIQ NQISSVERNL LLVTIFSSII QCFAAANTFI LQIDVQRATI 180
181 LGQAAQIMLP FASDFLTISQ PYILLFVSSK VRKNLRFLGF FN
|
| Detection Method: | |
| Confidence: | 3.72 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
