YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7448897
Organism:	Thermotoga maritima
Length:	201 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7448897.

Description	E-value	Query Range	Subject Range
gi\|20089036, gi\|... - gi\|20089036\|ref\|NP_615111.1\| dCMP deaminase [Methanosarcina acetivorans C2A], gi\|19913893\|gb\|AAM0359...	177.0	[0..53]	[199..4]
gi\|38111350, gi\|... - gi\|39971965\|ref\|XP_367373.1\| hypothetical protein MGG_07298 [Magnaporthe grisea 70-15], gb\|EAA56943....	173.0	[0..9]	[198..144]
gi\|48840663, gi\|... - gi\|73668393\|ref\|YP_304408.1\| dCMP deaminase [Methanosarcina barkeri str. Fusaro], gi\|72395555\|gb\|AAZ...	173.0	[0..52]	[199..3]
gi\|46137423, gi\|... - gi\|46137423\|ref\|XP_390403.1\| hypothetical protein FG10227.1 [Gibberella zeae PH-1], gi\|42547227\|gb\|E...	171.0	[0..9]	[199..184]
gi\|7448896 - pir\|\|C69470 dCMP deaminase homolog - Archaeoglobus fulgidus gi\|2648787, gi\|1... - gi\|2648787\|gb\|AAB89487.1\| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304], gi\|11499353\|re...	171.0	[0..52]	[197..2]
gi\|32412958, gi\|... - gi\|32412958\|ref\|XP_326959.1\| hypothetical protein [Neurospora crassa], gi\|28922452\|gb\|EAA31684.1\| hy... gi\|85100199 - gi\|85100199\|ref\|XP_960920.1\| hypothetical protein [Neurospora crassa OR74A]	169.0	[0..8]	[201..190]
gi\|77997272, gi\|... - gi\|78045157\|ref\|YP_361349.1\| putative comE operon protein 2 [Carboxydothermus hydrogenoformans Z-290...	169.0	[0..52]	[195..23]
gi\|20905903, gi\|... - gi\|21227525\|ref\|NP_633447.1\| dCMP deaminase [Methanosarcina mazei Go1], gi\|20905903\|gb\|AAM31119.1\| d...	169.0	[0..53]	[199..4]
gi\|110602066, gi... - gi\|222055762\|ref\|YP_002538124.1\| dCMP deaminase [Geobacter sp. FRC-32], gi\|221565051\|gb\|ACM21023.1\| ...	168.0	[0..52]	[200..2]

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Predicted Domain #1

Region A:
Residues: [1-201]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRLGLKLY YRRRGHVKPS LLFVIQSHKG EFVKDRLEEY LNNLKIEKKP DSRESWDSYF  60
   61 MRIARMVSER STCVHRKVGA VIVKDHRILA TGYNQPPSKF PHCNEIGCIR DDLEINSGEH 120
  121 QEICYALHAE QNALMQAAKF GIAVNGATIY VTHKPCSICA RLIVNAGIKR VVYEKDYPDP 180
  181 LTDFFFKFTG VESVRFVGDE M

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.69897
Match:	2hvvA
Description:	No description for 2hvvA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits