YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|33151785, gi\|...
Organism:	Haemophilus ducreyi 35000HP
Length:	151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33151785, gi|....

Description	E-value	Query Range	Subject Range
gi\|85059236, gi\|... - gi\|85059236\|ref\|YP_454938.1\| dATP pyrophosphohydrolase [Sodalis glossinidius str. 'morsitans'], gi\|8...	122.0	[0..4]	[149..1]
gi\|112822695, gi... - gi\|113460652\|ref\|YP_718718.1\| dATP pyrophosphohydrolase [Haemophilus somnus 129PT], gi\|112822695\|gb\|... gi\|168826174, gi... - gi\|46156589\|ref\|ZP_00132407.2\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	122.0	[0..4]	[148..1]
gi\|53733203 - gi\|53733203\|ref\|ZP_00156157.2\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	121.0	[0..3]	[148..1]
gi\|68057122, gi\|... - gi\|68248923\|ref\|YP_248035.1\| dATP pyrophosphohydrolase [Haemophilus influenzae 86-028NP], gi\|6805712...	119.0	[0..2]	[148..9]
NUDB_HAEIN - Dihydroneopterin triphosphate pyrophosphatase OS=Haemophilus influenzae GN=nudB PE=3 SV=1 NUDB_HAEIN - Dihydroneopterin triphosphate diphosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121...	118.0	[0..2]	[148..9]
gi\|30995367 - gi\|30995367\|ref\|NP_438482.2\| dATP pyrophosphohydrolase [Haemophilus influenzae Rd KW20]	117.0	[0..2]	[148..5]
gi\|53732944 - gi\|53732944\|ref\|ZP_00155323.2\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	115.0	[0..3]	[148..1]
gi\|52424764, gi\|... - gi\|52424764\|ref\|YP_087901.1\| dATP pyrophosphohydrolase [Mannheimia succiniciproducens MBEL55E], gi\|5...	115.0	[0..4]	[150..1]
gi\|197362107, gi... - gi\|197362107\|ref\|YP_002141744.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... gi\|56413181, gi\|... - gi\|56413181\|ref\|YP_150256.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar ...	113.0	[0..1]	[150..1]
gi\|205272175, gi... - gi\|205352394\|ref\|YP_002226195.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... gi\|206708382, gi... - gi\|207856579\|ref\|YP_002243230.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... lcl\|NC_016856.1_... - [gene=ntpA] [protein=dATP pyrophosphohydrolase] [protein_id=YP_005237864.1] [location=complement(200... gi\|197241881, gi... - gi\|197263626\|ref\|ZP_03163700.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serov... gi\|204930982, gi... - gi\|204930982\|ref\|ZP_03221808.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serov... gi\|194711487, gi... - gi\|194735985\|ref\|YP_002114935.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... gi\|197251500, gi... - gi\|197251500\|ref\|YP_002146122.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... gi\|194448668, gi... - gi\|194448668\|ref\|YP_002045953.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero... gi\|194472365, gi... - gi\|194472365\|ref\|ZP_03078349.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serov... gi\|195633921, gi... - gi\|195633921\|gb\|EDX52273.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar N... gi\|168820724, gi... - gi\|205342606\|gb\|EDZ29370.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar W... gi\|168241529, gi... - gi\|205339442\|gb\|EDZ26206.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar H... gi\|16420436, gi\|... - gi\|16765242\|ref\|NP_460857.1\| dATP pyrophosphohydrolase [Salmonella typhimurium LT2], gi\|16420436\|gb\|... gi\|205350551, gi... - gi\|205350551\|gb\|EDZ37182.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar H... gi\|205327906, gi... - gi\|205327906\|gb\|EDZ14670.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar 4... gi\|197288618, gi... - gi\|197288618\|gb\|EDY27993.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar S... gi\|205322892, gi... - gi\|205322892\|gb\|EDZ10731.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar S... gi\|62128111, gi\|... - gi\|62180478\|ref\|YP_216895.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica serovar ... gi\|224468122, gi... - gi\|224583595\|ref\|YP_002637393.1\| dATP pyrophosphohydrolase [Salmonella enterica subsp. enterica sero...	113.0	[0..1]	[150..1]

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Predicted Domain #1

Region A:
Residues: [1-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTTPYKNPN SVLIVIYAQN TKRVLMLQRK DDPSFWQSVT GSLEQQESAL EAAKREVLEE  60
   61 VGIDITQQKL TIYDCQKSVK FEIFPHFRYK YAPNVTHCCE HWFLLALPNE QTPTLTEHLT 120
  121 FKWLSADEAI HLTKSPNNAA AIAKYLLNQA D

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.69897
Match:	2o1cA
Description:	No description for 2o1cA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits