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View Structure Prediction Details

Protein: AB21G_ARATH, WBC...
Organism: Arabidopsis thaliana
Length: 467 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB21G_ARATH, WBC....

Description E-value Query
Range
Subject
Range
AB21G_ARATH - ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=2
372.0 [0..1] [463..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPPNEQESS FPKTPSANRH ETSPVQENRF SSPSHVNPCL DDDNDHDGPS HQSRQSSVLR  60
   61 QSLRPIILKF EELTYSIKSQ TGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 2hydA
Description: No description for 2hydA was found.

Predicted Domain #2
Region A:
Residues: [84-467]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSYWFGSQEP KPNRLVLKCV SGIVKPGELL AMLGPSGSGK TTLVTALAGR LQGKLSGTVS  60
   61 YNGEPFTSSV KRKTGFVTQD DVLYPHLTVM ETLTYTALLR LPKELTRKEK LEQVEMVVSD 120
  121 LGLTRCCNSV IGGGLIRGIS GGERKRVSIG QEMLVNPSLL LLDEPTSGLD STTAARIVAT 180
  181 LRSLARGGRT VVTTIHQPSS RLYRMFDKVL VLSEGCPIYS GDSGRVMEYF GSIGYQPGSS 240
  241 FVNPADFVLD LANGITSDTK QYDQIETNGR LDRLEEQNSV KQSLISSYKK NLYPPLKEEV 300
  301 SRTFPQDQTN ARLRKKAITN RWPTSWWMQF SVLLKRGLKE RSHESFSGLR IFMVMSVSLL 360
  361 SGLLWWHSRV AHLQDQVKQN KPWY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.69897
Match: 1z47A
Description: Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle