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View Structure Prediction Details

Protein: CAND1_ARATH
Organism: Arabidopsis thaliana
Length: 1219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CAND1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS SIILQQLDDV  60
   61 AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD QHRDTASIAL RTVVAQIAPT 120
  121 LAPSILVTLT PQMIGGISGQ GMSSGIKCEC LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL 180
  181 GCNQATVRKK TVTCIASLAS SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR 240
  241 AVGYRFGTHL GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL 300
  301 TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA AKCLAGLIVS 360
  361 RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR QTGNVTKGQT DTDESSPKWL 420
  421 LKQEVSKIVK SINRQLREKS VKTKVGAFSV LRELVVVLPD CLADHIGSLV PGIERALNDK 480
  481 SSTSNLKIEA LVFTKLVLAS HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV 540
  541 RVVRPSTAGM GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE 600
  601 LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG FLRKANRVLR 660
  661 QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH MTALALELCC TLMTGKSCSE 720
  721 NISLAVRNKV LPQALTLVKS PLLQGQALLD LQKFFEALVY HANTSFYTLL ESLLSCAKPS 780
  781 PQSGGVPKQA LYSIAQCVAV LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG 840
  841 EIGRRKDLSA HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ 900
  901 KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV VAECLGKMAL 960
  961 IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL DEIIFPQISS FLMLIKDGDR1020
 1021 HVRRAAVSAL STFAHYKPNL IKGLLPELLP LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE1080
 1081 LRKAAFECVF TLVDSCLDQV NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL1140
 1141 AVLDSLVEPL HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM1200
 1201 GDMKRSVPLW EKFQTIRNE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 180.0
Match: 1u6gC
Description: Crystal Structure of The Cand1-Cul1-Roc1 Complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle