| Protein: | SIFR-PC, SIFR-PA |
| Organism: | Drosophila melanogaster |
| Length: | 758 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIFR-PC, SIFR-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..1] | [519..1] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MMAASGRIRK RKHKSHTSGD VPSTTTSVPM PIPTMAPGKM VAETMEEAAA LAGDYNNFTH 60
61 NFVDLQNLLS FNELNGTSGS GGTAVSSLGS SSAIKLNNSA ITDTLLGTVL TTATATVAPA 120
121 ASSLLATLAA TTTASARGSL AGKSLAIADA TSSTYYSNLL NLSPATTSLI SAAA
|
| Detection Method: |  |
| Confidence: | 39.0 |
| Match: | 1xwdC |
| Description: | Crystal Structure of Human Follicle Stimulating Hormone Complexed with its Receptor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [175-562] |
1 11 21 31 41 51
| | | | | |
1 ATKSYNDSAL RWEQLDGSVD FGFDPLYRHS LAMSMVYCVA YIVVFLVGLI GNSFVIAVVL 60
61 RAPRMRTVTN YFIVNLAIAD ILVIVFCLPA TLIGNIFVPW MLGWLMCKFV PYIQGVSVAA 120
121 SVYSLIAVSL DRFIAIWWPL KQMTKRRARI MIIGIWVIAL VTTIPWLLFF DLVPAEEVFS 180
181 DALVSAYSQP QFLCQEVWPP GTDGNLYFLL ANLVACYLLP MSLITLCYVL IWIKVSTRSI 240
241 PGESKDAQMD RMQQKSKVKV IKMLVAVVIL FVLSWLPLYV IFARIKFGSD ISQEEFEILK 300
301 KVMPVAQWLG SSNSCINPIL YSVNKKYRRG FAAIIKSRSC CGRLRYYDNV AIASSTTSTR 360
361 KSSHYHQNSS RKSPSSKGNA VSYIYEHN
|
| Detection Method: | |
| Confidence: | 51.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [563-758] |
1 11 21 31 41 51
| | | | | |
1 SLRRHNMMLK QDSNLSQQML LKQDSHGSRQ FLIKQESSCS DASGIRRPLC QQDSNGSKVS 60
61 LSKQDSIVSY MEARRSAGHG LNDTLVDRDS VSMDVGRRQG ATPSSLLDKR QKFVKQDSVI 120
121 SFVDQRPEQR RHQLVKQDSV ISFADQRRGL LHKQDSLMAN RTGDAPTHHV SILKKTDSQL 180
181 SYGSSTSPRR NADLYE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
