YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD1_ASHGO
Organism:	Eremothecium gossypii
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_ASHGO.

Description	E-value	Query Range	Subject Range
gi\|42545872, gi\|... - gi\|46105394\|ref\|XP_380501.1\| hypothetical protein FG00325.1 [Gibberella zeae PH-1], gi\|42545872\|gb\|E...	120.0	[0..2]	[102..1]
gi\|57227377, gi\|... - gi\|58267974\|ref\|XP_571143.1\| hypothetical protein CNE04540 [Cryptococcus neoformans var. neoformans ... gi\|50257833, gi\|... - gi\|50257833\|gb\|EAL20534.1\| hypothetical protein CNBE4540 [Cryptococcus neoformans var. neoformans B-...	110.0	[0..1]	[86..1]
gi\|83773045 - gi\|83773045\|dbj\|BAE63173.1\| unnamed protein product [Aspergillus oryzae] gi\|169779683 - gi\|169779683\|ref\|XP_001824306.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238500355, gi... - gi\|238500355\|ref\|XP_002381412.1\| DASH complex subunit DAD1, putative [Aspergillus flavus NRRL3357], ...	109.0	[0..4]	[104..7]
gi\|190405009 - gi\|190405009\|gb\|EDV08276.1\| DASH complex subunit DAD1 [Saccharomyces cerevisiae RM11-1a] DAD1 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced... gi\|151942004 - gi\|151942004\|gb\|EDN60360.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] DAD1_YEAST - DASH complex subunit DAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD1 PE=1 SV=1	109.0	[0..1]	[86..1]
gi\|111062680 - gi\|111062680\|gb\|EAT83800.1\| hypothetical protein SNOG_08632 [Phaeosphaeria nodorum SN15]	105.0	[0..1]	[97..1]
gi\|88179386, gi\|... - gi\|88179386\|gb\|EAQ86854.1\| hypothetical protein CHGG_08107 [Chaetomium globosum CBS 148.51], gi\|1161...	105.0	[0..1]	[100..1]
DAD1_KLULA - DASH complex subunit DAD1 OS=Kluyveromyces lactis GN=DAD1 PE=3 SV=1 DAD1_KLULA - DASH complex subunit DAD1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...	104.0	[0..12]	[94..7]
gi\|114192175, gi... - gi\|115399406\|ref\|XP_001215292.1\| predicted protein [Aspergillus terreus NIH2624], gi\|114192175\|gb\|EA...	102.0	[0..11]	[95..8]
gi\|119191756, gi... - gi\|90305270\|gb\|EAS34901.1\| predicted protein [Coccidioides immitis RS], gi\|119191756\|ref\|XP_00124648...	96.0	[0..19]	[89..12]
gi\|66850886, gi\|... - gi\|70996991\|ref\|XP_753250.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668508...	95.0	[0..8]	[95..2]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMSKDIATT PELSEPDKYF VEQRDLLLQE ITSTLDSILN NLNGLNISLE NSIAVGKEFE  60
   61 SVSELWKVFY DGLANGAAPG VAAANPSSQD LPTEPVAAHQ NAAAGNSDAP APSQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	35.022276
Match:	PF08649.1
Description:	No description for PF08649.1 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.600	N/A	N/A	a.45.1	Glutathione S-transferase (GST), C-terminal domain
View	Download	0.564	N/A	N/A	a.45.1	Glutathione S-transferase (GST), C-terminal domain
View	Download	0.564	N/A	N/A	a.45.1	Glutathione S-transferase (GST), C-terminal domain
View	Download	0.477	N/A	N/A	a.77.1	DEATH domain
View	Download	0.474	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.471	N/A	N/A	a.4.1	Homeodomain-like
View	Download	0.459	N/A	N/A	a.24.9	alpha-catenin/vinculin
View	Download	0.437	N/A	N/A	a.77.1	DEATH domain
View	Download	0.391	N/A	N/A	a.45.1	Glutathione S-transferase (GST), C-terminal domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits