YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|12722204, gi\|...
Organism:	Pasteurella multocida subsp. multocida str. Pm70
Length:	169 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12722204, gi|....

Description	E-value	Query Range	Subject Range
gi\|71907412, gi\|... - gi\|71907412\|ref\|YP_284999.1\| molybdopterin-guanine dinucleotide biosynthesis MobB region [Dechloromo...	154.0	[0..2]	[166..1]
gi\|148826503, gi... - gi\|148826503\|ref\|YP_001291256.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophi... gi\|144987117, gi... - gi\|145632210\|ref\|ZP_01787945.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophil... gi\|229810907, gi... - gi\|229845903\|ref\|ZP_04466015.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophil... gi\|46129177 - gi\|46129177\|ref\|ZP_00202024.1\| COG1763: Molybdopterin-guanine dinucleotide biosynthesis protein [Hae... gi\|229844720, gi... - gi\|229844720\|ref\|ZP_04464859.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophil...	150.0	[0..2]	[169..5]
gi\|68057644, gi\|... - gi\|68249445\|ref\|YP_248557.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophilus ...	149.0	[0..2]	[169..12]
gi\|148828035, gi... - gi\|148828035\|ref\|YP_001292788.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophi... gi\|145272674, gi... - gi\|145638345\|ref\|ZP_01793955.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophil... gi\|144980023, gi... - gi\|145628248\|ref\|ZP_01784049.1\| molybdopterin-guanine dinucleotide biosynthesis protein B [Haemophil... gi\|42631168 - gi\|42631168\|ref\|ZP_00156706.1\| COG1763: Molybdopterin-guanine dinucleotide biosynthesis protein [Hae...	148.0	[0..2]	[169..5]
MOBB_HAEIN - Molybdopterin-guanine dinucleotide biosynthesis protein B OS=Haemophilus influenzae GN=mobB PE=1 SV=... MOBB_HAEIN - Molybdopterin-guanine dinucleotide biosynthesis adapter protein OS=Haemophilus influenzae (strain AT...	148.0	[0..2]	[169..12]
gi\|54308437, gi\|... - gi\|54308437\|ref\|YP_129457.1\| hypothetical protein PBPRA1244 [Photobacterium profundum SS9], gi\|46912...	148.0	[0..1]	[164..1]
gi\|52426111, gi\|... - gi\|52426111\|ref\|YP_089248.1\| MobB protein [Mannheimia succiniciproducens MBEL55E], gi\|52308163\|gb\|AA...	148.0	[0..3]	[169..16]
gi\|53803404, gi\|... - gi\|53803404\|ref\|YP_114864.1\| molybdopterin-guanine dinucleotide biosynthesis protein MobB [Methyloco... gi\|23485201 - gi\|23485201\|gb\|EAA20276.1\| molybdopterin guanine dinucleotide synthesis protein B [Plasmodium yoelii... gi\|82913607 - gi\|82913607\|ref\|XP_728711.1\| molybdopterin guanine dinucleotide synthesis protein B [Plasmodium yoel...	146.0	[0..2]	[168..3]
gi\|90325716, gi\|... - gi\|90413315\|ref\|ZP_01221309.1\| hypothetical protein P3TCK_17109 [Photobacterium profundum 3TCK], gi\|...	145.0	[0..1]	[164..1]
gi\|113899772, gi... - gi\|159897168\|ref\|YP_001543415.1\| cobalamin synthesis protein P47K [Herpetosiphon aurantiacus ATCC 23...	144.0	[0..3]	[166..7]

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Predicted Domain #1

Region A:
Residues: [1-169]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFMLGITGY SGSGKTTLLE QLVPILNQHG IKVSVIKHSH HDAQVDKVGK DSWRMKEAGA  60
   61 NQVMMTCDNR WALMTETPTQ PANLAYLAQH FDPHLTDLIL VEGFKHEPIE KILLHRQEMT 120
  121 KPLPELDQYV IALATNYPLS STVPVLDIND ITRIATFIQH WYQQKCGAK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	1p9nA
Description:	Molybdopterin-guanine dinucleotide biosynthesis protein MobB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.37148167194523	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: