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View Structure Prediction Details

Protein: MUR3_ARATH
Organism: Arabidopsis thaliana
Length: 619 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUR3_ARATH.

Description E-value Query
Range
Subject
Range
gi|110740845 - gi|110740845|dbj|BAE98519.1| hypothetical protein [Arabidopsis thaliana]
739.0 [0..1] [619..1]
gi|222624183, gi... - gi|222624183|gb|EEE58315.1| hypothetical protein OsJ_09385 [Oryza sativa Japonica Group], gi|1154506...
629.0 [0..6] [618..3]
KATAM_ORYSA - Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice)
KATAM_ORYSJ - Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 P...
611.0 [0..20] [618..1]
gi|92893997 - gi|92893997|gb|ABE92010.1| Exostosin-like [Medicago truncatula]
606.0 [0..7] [618..1]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPRVSMRRR SAEVSPTEPM EKGNGKNQTN RICLLVALSL FFWALLLYFH FVVLGTSNID  60
   61 KQLQLQPSYA QSQPSSVSLR VDKFPIEPHA APSKPPPKEP LVTIDKPILP PAPVANSSST 120
  121 FKPPRIVESG KKQEFSFIRA LKTVDNKSDP CG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [153-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKYIYVHNLP SKFNEDMLRD CKKLSLWTNM CKFTTNAGLG PPLENVEGVF SDEGWYATNQ  60
   61 FAVDVIFSNR MKQYKCLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.826 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.719 N/A N/A a.156.1 S13-like H2TH domain
View Download 0.661 N/A N/A a.39.1 EF-hand
View Download 0.661 N/A N/A a.39.1 EF-hand
View Download 0.536 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.536 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.527 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.527 N/A N/A a.144.1 PABC (PABP) domain
View Download 0.522 N/A N/A a.5.10 Description not found.

Predicted Domain #3
Region A:
Residues: [231-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDSSLAAAIF VPFYAGFDIA RYLWGYNISR RDAASLELVD WLMKRPEWDI MRGKDHFLVA  60
   61 GRITWDFRRL SEEETDWGNK LLFLPAAKNM SMLVVESSPW NANDFGIPYP TYFHPAKDSE 120
  121 VFEWQDRMRN LERKWLFSFA GAPRPDNPKS IRGQIIDQCR NSNVGKLLEC DFG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [404-619]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESKCHAPSSI MQMFQSSLFC LQPQGDSYTR RSAFDSMLAG CIPVFFHPGS AYTQYTWHLP  60
   61 KNYTTYSVFI PEDDVRKRNI SIEERLLQIP AKQVKIMREN VINLIPRLIY ADPRSELETQ 120
  121 KDAFDVSVQA VIDKVTRLRK NMIEGRTEYD YFVEENSWKY ALLEEGQREA GGHVWDPFFS 180
  181 KPKPGEDGSS DGNGGTTISA DAAKNSWKSE QRDKTQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle