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View Structure Prediction Details

Protein: gi|222631352, gi...
Organism: Oryza sativa Japonica Group
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222631352, gi....

Description E-value Query
Range
Subject
Range
gi|115435850, gi... - gi|6630689|dbj|BAA88535.1| putative Pad1 [Oryza sativa Japonica Group], gi|34903124|ref|NP_912909.1|...
gi|125525319 - gi|125525319|gb|EAY73433.1| hypothetical protein OsI_01313 [Oryza sativa Indica Group]
323.0 [0..1] [307..1]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLQRIFGA SGMGQPPSDS PLLDSSEQVY ISSLALLKML KHGRAGVPME VMGLMLGEFV  60
   61 DDYTVRVVDV FAMPQSGTGV SVEAVDHVFQ TNMLDMLKQT GRPEMVVGWY HSHPGFGCWL 120
  121 SGVDINTQQS FEALNPRAVA VVIDPIQSVK GKVVIDAFRL INPQTMMLGQ EPRQTTSNVG 180
  181 HLNKPSIQAL IHGLNRHYYS IAINYRKNEL EEKMLLNLHK K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [222-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KWTDGLILKR FDTHSKTNEQ TVQEMLNLAI KYNKAVQEED ELPPEKLAIA NVGRQDAKKH  60
   61 LEEHVSNLMS SNIVQTLGTM LDTVVF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle