YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|58331797, gi\|...
Organism:	Arabidopsis thaliana
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|58331797, gi|....

Description	E-value	Query Range	Subject Range
gi\|114197187, gi... - gi\|115491399\|ref\|XP_001210327.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	221.0	[0..1]	[202..143]
gi\|83774048 - gi\|83774048\|dbj\|BAE64173.1\| unnamed protein product [Aspergillus oryzae] gi\|169781686 - gi\|169781686\|ref\|XP_001825306.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220693753, gi... - gi\|238498488\|ref\|XP_002380479.1\| F1F0 ATP synthase assembly protein Atp10, putative [Aspergillus fla...	218.0	[0..1]	[202..143]
gi\|79338671, gi\|... - gi\|79338671\|ref\|NP_172300.2\| unknown protein [Arabidopsis thaliana], gi\|110736304\|dbj\|BAF00122.1\| hy...	216.0	[0..1]	[202..73]
gi\|40746667, gi\|... - gi\|67519696\|ref\|XP_658834.1\| hypothetical protein AN1230.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	216.0	[0..2]	[202..139]
gi\|85118589 - gi\|85118589\|ref\|XP_965478.1\| hypothetical protein NCU02705 [Neurospora crassa OR74A] gi\|38567214, gi\|... - gi\|38567214\|emb\|CAE76506.1\| related to F1F0 ATPase complex assembly protein [Neurospora crassa], gi\|...	214.0	[0..1]	[201..145]
gi\|116207034, gi... - gi\|88183407\|gb\|EAQ90875.1\| hypothetical protein CHGG_02810 [Chaetomium globosum CBS 148.51], gi\|1162...	211.0	[0..1]	[201..134]
gi\|38104073, gi\|... - gi\|39944942\|ref\|XP_362008.1\| hypothetical protein MGG_04453 [Magnaporthe grisea 70-15], gb\|EAA50694....	203.0	[0..3]	[201..232]
gi\|159131170 - gi\|159131170\|gb\|EDP56283.1\| F1F0 ATP synthase assembly protein Atp10, putative [Aspergillus fumigatu... gi\|70995313, gi\|... - gi\|70995313\|ref\|XP_752415.1\| F1F0 ATP synthase assembly protein Atp10 [Aspergillus fumigatus Af293],...	199.0	[0..1]	[202..135]
gi\|215708812, gi... - gi\|50511421\|gb\|AAT77344.1\| unknown protein [Oryza sativa Japonica Group], gi\|222630383\|gb\|EEE62515.1...	195.0	[0..1]	[202..57]

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Predicted Domain #1

Region A:
Residues: [1-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRGYFADMK EFKEHGGKIA AANKTIIPAA SAIKFPVLAV TFSNGKSLKL PIAPNSNEVD  60
   61 TESLVVPKVS LVCLSFRASS QEMISSWSKP FLESFGNRKD LQLFEVSFID KWLLGLAPIR 120
  121 KLLLRVLQKP NNNENSVLQR QVGYAFGDHY YFRKEIKVLN LLTGYILLLD KSGRIRWQGF 180
  181 GTATPEEVSQ LLSCTSLLLE DQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits