| Protein: | gi|32402450, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|32402450, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..1] | [211..1] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MRKGKRVIKK IEEKIKRQVT FAKRKKSLIK KAYELSVLCD VHLGLIIFSH SNRLYDFCSN 60
61 STSMENLIMR YQKEKEGQTT AEHSFHS
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [88-213] |
1 11 21 31 41 51
| | | | | |
1 CSDCVKTKES MMREIENLKL NLQLYDGHGL NLLTYDELLS FELHLESSLQ HARARKSEFM 60
61 HQQQQQQTDQ KLKGKEKGQG SSWEQLMWQA ERQMMTCQRQ KDPAPANEGG VPFLRWGTTH 120
121 RRSSPP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.325 | N/A | N/A | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.319 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.284 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.241 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.225 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
